Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946758.1_cds_XP_016488784.1_79380
CDS Infomation

[gene=LOC107808734] [db_xref=GeneID:107808734] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016488784.1] [location=join(2479..3393,4030..4650)] [gbkey=CDS]
Sequence

ATGGAGTTTCAGTTTCCATTCAACTTAACTTTCTTATTCCTTTTCCTATCATTCCTCTTT
CTAGTACTAAGTAAATGGAAAAAATCAAAAAACTTAAGCAAGAAACTGCCTCCAGGTCCA
TGGAAATTGCCTATTTTAGGAAGTGTCCATCACTTGGCATTGGAAGGTGGACATCCCCAC
CATGCACTTGCAAACTTGGCCAAAAAATATGGACCTGATCTCATGCACCTTCAACTAGGT
GAAATTTCTACGGTCGTGGTTTCTTCTCTCGACATGGCGCGAGAGGTACTAAAAACTCAT
GACCTCGCTTTTGCATCGAGGCCTAAACTATTGGCCCTCGAGATAATATTTTACAAGAGC
ACAGACATTGCATTTAGTGCTTACGGTGATTACTGGAGACAAATGCGCAAAGTCGCTGTC
TTGGAACTGCTCTCTGCCAAGAACGTTCGGTCCTTTACTTCTATTAGGCGTGACGAGGCT
TCTCGTCTCATACAAATTATCCGGTCATCGCCAACGGACGAGCCAATAAATGTTACTGAA
AGGATCTTATGGTACGAGAGCTCCATGACCTGCAAAGCAGCATTTGGAGAATTGTTAAAA
GACCAAAAAAAGTTCATTCTAATAGTAAGGGAATTGACAGAATTATCAGGTGGCTTTAGT
GTGGCCGACATTTTCCCTTCAATCAAGATCCTTCATTTGCTAAGTGGAATGAAGGGTAGA
ATTTTGAATACTCACAAAAGAGTAGATGCTATTGTTGAGGATGTTATCAATGAGCATATA
AAGAATCTTGCAAATGGTAAAGCAGGCAATGGTGCATTAGGAGGTGAAGATCTAGTTGAT
GTTCTACTAAGACTAAAGGAAAGTGGGGAACTTCAAATCCCAATCACCAATGACAACATC
AAAGCAGTTATGATTGACCTGTTCTCTGCCGGAACAGAAACTTCATCAACAACAACAATA
TGGGCCATGACAGAAATGATGAGGAACCCAAAAGTGTATGCAAAGGCACAAGCTGAGGTA
AGAGAAGTATTCAAAGGAAAAGAAACCATCGACGAGGATAACATTGAGGAGTTGAAATAC
CTAAAACAAGTTGTTAAAGAAACCTTGAGACTTCACCCTCCGCTCCCTCTCTTGCTTCCA
AGAGAGTGTAGGGAGGAAACAAACATCAATGGATACACTATCCCATTAAAAACAAGAGTC
ATGGTTAATGCTTGGGCAATTGGGAGGGATCCAAAGTATTGGGAAGACGCGGAACAGTTT
AAGCCAGAGAGATTTGAGCATGTCTCTGTGGATTTCATGGGAAATAACTTTGAGTATCTC
CCTTTTGGTTCCGGAAGGAGAATGTGTCCTGGAATTTCATTTGGTTTAATAAATGTCCAC
CTTCCACTAGCTAAATTGCTCTATCATTGTGACTGGAAACTCCCTGATGGTGTCAAACCT
GAAGATTTGGACATGACTGAGTTTACTGCTATAACTGCAGCAAGAAAGAGTGAGTTATAC
TTGATTGCTACTCCTTATCATCCTTCTCAAGAATGA

Peptide Sequence

PEP ID

XP_016488784.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MEFQFPFNLTFLFLFLSFLFLVLSKWKKSKNLSKKLPPGPWKLPILGSVHHLALEGGHPH
HALANLAKKYGPDLMHLQLGEISTVVVSSLDMAREVLKTHDLAFASRPKLLALEIIFYKS
TDIAFSAYGDYWRQMRKVAVLELLSAKNVRSFTSIRRDEASRLIQIIRSSPTDEPINVTE
RILWYESSMTCKAAFGELLKDQKKFILIVRELTELSGGFSVADIFPSIKILHLLSGMKGR
ILNTHKRVDAIVEDVINEHIKNLANGKAGNGALGGEDLVDVLLRLKESGELQIPITNDNI
KAVMIDLFSAGTETSSTTTIWAMTEMMRNPKVYAKAQAEVREVFKGKETIDEDNIEELKY
LKQVVKETLRLHPPLPLLLPRECREETNINGYTIPLKTRVMVNAWAIGRDPKYWEDAEQF
KPERFEHVSVDFMGNNFEYLPFGSGRRMCPGISFGLINVHLPLAKLLYHCDWKLPDGVKP
EDLDMTEFTAITAARKSELYLIATPYHPSQE

Transcript Sequence

Gene sequence data has not been registered.